Lesson 5 · 25 min

Capillary electrophoresis

No stationary phase, only a field: ions race along a narrow tube according to their mobilities. Mobilities and diffusion coefficients follow from ionic conductivities, electro-osmotic flow sweeps everything to the detector, and hundreds of thousands of plates pull apart even very similar ions.

In this lesson

  • Calculate electrophoretic mobilities and diffusion coefficients from ionic conductivities, and explain why the hydrated lithium ion is the slowest
  • Explain where electro-osmotic flow comes from, and how it carries cations, neutral molecules and slow anions past the detector
  • Calculate migration times, diffusion-limited plate counts and resolution, and judge when a higher voltage will not help

Put 25 kV across a fused-silica capillary 50 μm wide and the ions in the solution race towards the electrodes, each at its own speed. Within minutes ions of remarkably similar properties separate, with hundreds of thousands of theoretical plates: this is capillary electrophoresis. Arrays of capillaries sequenced DNA in the later years of the Human Genome Project; analytical labs use them for ions in drinking water, drug enantiomers and proteins. There is no stationary phase — separation rests entirely on each ion’s mobility in the field.

Predict first

A mixture of K⁺, Na⁺, Li⁺ and Mg²⁺ is run in normal polarity (cations move towards the detector). Which arrives first?

Pick an answer and lock it in before you look. A wrong guess teaches more than no guess.

Mobility comes from conductivity

An ion in a field E drifts at v = μE; the proportionality constant μ is its electrophoretic mobility. Conductivity measures the same thing — how fast a mole of charge moves in unit field — so the limiting ionic conductivity λ° (per equivalent) from the conductometry lesson divided by the Faraday constant is the mobility. The same table gives diffusion coefficients too: the Nernst–Einstein relation ties mobility to diffusion, because the friction that sets how fast an ion migrates also sets how fast it diffuses.

μep=λ∘F,D=RTλ∘∣z∣F2,tm=LdLt(μep+μeo) V\mu_\text{ep} = \frac{\lambda^\circ}{F}, \qquad D = \frac{RT\lambda^\circ}{|z|F^2}, \qquad t_\text{m} = \frac{L_\text{d}L_\text{t}}{(\mu_\text{ep} + \mu_\text{eo})\,V}
Mobility and diffusion coefficient from conductivity; the migration time follows from the apparent mobility (electrophoretic plus electro-osmotic), the capillary lengths and the voltage.
λ∘\lambda^\circ
limiting ionic conductivity (per equivalent)
μeo\mu_\text{eo}
electro-osmotic mobility
Ld,LtL_\text{d}, L_\text{t}
length to the detector and total length
VV
applied voltage

Electro-osmotic flow

Silanol groups on the silica wall ionise to SiOX−\ce{SiO-} above pH 3 and hold a layer of cations against the wall. With the voltage on, that layer moves towards the cathode and drags the whole column of solution with it: electro-osmotic flow. It pushes the liquid like a piston, with nearly the same speed across the bore — not fast in the middle and slow at the wall as in pressure-driven liquid chromatography — so the flow itself does not broaden the zones. The flow is usually faster than the electrophoresis of most ions, so cations, neutral molecules and slow anions are all carried to a detector near the cathode end; fast inorganic anions need a cationic surfactant to reverse the wall charge, and a reversed voltage. For a wall zeta potential of −50 mV the electro-osmotic mobility is μeo=−εζ/η≈3.9×10−4 cm2 V−1 s−1\mu_\text{eo} = -\varepsilon\zeta/\eta \approx 3.9\times10^{-4}\ \text{cm}^2\,\text{V}^{-1}\,\text{s}^{-1}.

Mobilities from ionic conductivities · peak widths from Nernst–Einstein diffusion

Capillary electrophoresis: separating ions by mobility

Ion zones inside the capillary
inlet (+)detector(−)EOF
Electropherogram
K⁺ NH₄⁺ Ca²⁺ Mg²⁺ Na⁺ Li⁺ 90100110120130140migration time / sdetector signal
Ion by ion
Ionμ_ep (10⁻⁴ cm² V⁻¹ s⁻¹)μ_appMigration timePlatesR_s to next peak
KX+\ce{K+}7.6212.6295.1 s672 k30.21
NHX4X+\ce{NH4+}7.6212.6295.1 s672 k0.03
CaX2+\ce{Ca^2+}6.1611.16107.5 s1469 k19.02
MgX2+\ce{Mg^2+}5.4910.49114.4 s1549 k7.59
NaX+\ce{Na+}5.1910.19117.8 s796 k28.49
LiX+\ce{Li+}4.019.01133.2 s911 k—
Each ion’s mobility μ_ep = λ°/F and diffusion coefficient D = RTλ°/(|z|F²) come from its limiting ionic conductivity at 25 °C (CRC Handbook); the electro-osmotic mobility is adjustable, and for the anion sample a surfactant is assumed to reverse the wall charge and the voltage is reversed. Peak widths count longitudinal diffusion only, so the plate counts are upper limits; real capillaries add Joule heating, wall adsorption and the length of the injected plug. Every ion is injected in equal amount.
Drag the time and watch the zones pull apart in the capillary and pass the detector one after another. Halve the voltage: migration times double and plate counts halve. Set the electro-osmotic flow to zero: the cations slow down but keep their order. Notice K⁺ and NH₄⁺: whatever you change, they stay on top of each other. Finally, try the anion sample with its reversed flow.

Worked example

Migration time and plate count of sodium

A capillary is 60 cm long with the detector at 50 cm; the voltage is 25 kV and the electro-osmotic mobility 5.0×10−4 cm2 V−1 s−15.0\times10^{-4}\ \text{cm}^2\,\text{V}^{-1}\,\text{s}^{-1}. Na⁺ has λ° = 50.08 S cm² mol⁻¹. Find its migration time and diffusion-limited plate count.

Concept check

K⁺ and NH₄⁺ have λ° of 73.48 and 73.5 S cm² mol⁻¹. How can capillary electrophoresis separate them?

Try the calculation

Under the same conditions (60 cm/50 cm, 25 kV, electro-osmotic mobility 5.0×10−45.0\times10^{-4}), what is the migration time (s) of K⁺ (λ° = 73.48 S cm² mol⁻¹)?

s

Key takeaways

  • Electrophoretic mobility μ_ep = λ°/F and diffusion coefficient D = RTλ°/(|z|F²) both come from the ionic-conductivity table; ions with thick hydration shells (Li⁺) are the slowest.
  • The negatively charged silica wall drives a piston-like electro-osmotic flow that carries cations, neutral molecules and slow anions towards the detector at the cathode end.
  • When only diffusion broadens the zones N = μ_app V L_d/(2D L_t), reaching hundreds of thousands of plates; resolution R_s = (√N/4)Δμ/μ̄, so extra voltage cannot separate ions of nearly equal mobility.
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Data and references

  1. J. W. Jorgenson & K. D. Lukacs, “Zone electrophoresis in open-tubular glass capillaries”, Anal. Chem. 53, 1298–1302 (1981).
  2. CRC Handbook of Chemistry and Physics, 97th ed. (2016), “Ionic conductivity and diffusion at infinite dilution”.
  3. D. C. Harris, Quantitative Chemical Analysis, 9th ed. (2016), chapter on capillary electrophoresis.
  4. D. A. Skoog, F. J. Holler & S. R. Crouch, Principles of Instrumental Analysis, 7th ed. (Cengage, 2018), Ch. 30.